.. FRETBursts documentation master file, created by sphinx-quickstart on Fri Mar 07 15:30:19 2014. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. Single-molecule FRET burst analysis ========================================== .. raw:: html


**FRETBursts** is an open-source python package for burst analysis of freely-diffusing `single-molecule FRET `__ data for single and multi-spot experiments. FRETBursts supports both single-laser and dual-laser alternated excitation (`ALEX `__ and `PAX `__) as well as `ns-ALEX `__ (or `PIE `__). We provide well-tested implementations of state-of-the-art algorithms for confocal smFRET analysis. We focus on computational reproducibility, by using `Jupyter notebook `__ based interfaces. Please send questions or report issue on `GitHub `__. .. raw:: html

Documentation

.. toctree:: :maxdepth: 1 Introducing FRETBursts getting_started What's New? μs-ALEX Tutorial List of Jupyter Notebooks Reference manual .. raw:: html

Features

.. toctree:: :maxdepth: 1 FRETBursts Paper Burst Search Algorithm BVA 2CDE Exporting burst data Report an issue